The Allende Lab

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Divulgación (en Español)

PUBLICATIONS (Since 2012)


Villegas R, Martin SM, O’Donnell K, Carrillo S, Sagasti A, Allende ML. 2012. Dynamics of degeneration and regeneration of zebrafish peripheral axons reveals a requirement for extrinsic cell types. Neural Dev 7:19.

Quezada M, Alvarez M, Peña OA, Henríquez S, d’Alençon CA, Lange S, Oliva B, Owen GI, Allende ML. 2013. Antiangiogenic, antimigratory and antiinflammatory effects of 2-Methoxyestradiol in zebrafish larvae. Comparative Biochemistry and Physiology, Part C. 157:141-149.

Armas P, Margarit E, Mouguelar VS, Allende ML, Calcaterra NB. 2013. Beyond the binding site: in vivo identification of tbx2, smarca5 and wnt5b as molecular targets of CNBP during embryonic development. PLoS One. 8: e63234.

Moya-Díaz J, Peña O, Sánchez M, Ureta D, Reynaert N, Anguita-Salinas C, Marín G, Allende ML. 2014. Electroablation: a method for axotomy and localized tissue injury. BMC Dev Biol. 14(1):7.

Lange S, Aranda E, Gonzalez I, Valenzuela R, Pinto M, Elliot M, Alvarez M, Henriquez S, Velasquez EV, Orge F, Oliva B, Gonzalez P, Villalon M, Cautivo KM, Kalergis AM, Pereira K, Mendoza C, Saez C, Kato S, Cuello MA, Parborell F, Irusta G, Palma V, Allende ML, Owen GI. 2014. Independent anti-angiogenic capacities of coagulation factors X and Xa. J Cell Physiol 229:1673-1680.

Ceci ML, Mardones-Krsulovic C, Sánchez M, Valdivia L, Allende ML. 2014. Axon-Schwann cell interactions during peripheral nerve regeneration in zebrafish larvae. Neural Dev 9:22.

Schenck TL, Hopfner U, Chávez MN, Machens HG, Somlai-Schweiger I, Giunta RE, Bohne AV, Nickelsen J, Allende ML, Egaña JT. 2015. Photosynthetic biomaterials: a pathway towards autotrophic tissue engineering. Acta Biomaterialia 15:39-47.

Alvarez M, Reynaert N, Chávez MN, Aedo G, Araya F, Hopfner U, Fernández J, Allende ML, Egaña JT. 2015. Generation of viable plant-vertebrate chimeras. PLoS One 10(6): e0130295.

Rojas A, Aguilar R, Henriquez B, Lian JB, Stein JL, Stein GS, van Wijnen AJ, van Zundert B, Allende ML, Montecino M. 2015. Epigenetic Control of the Bone-master Runx2 Gene During Osteoblast-lineage Commitment by the Histone Demethylase JARID1B/KDM5B. J Biol Chem 290(47): 28329-42.

Cotoras DD, Allende ML. 2015. Was the tailbud the ancestral center where the fin developmental program evolved in chordates? Contributions Zoology 84(4): 317-328.

Chávez MN, Schenk TL, Hopfner U, Centeno C, Machens H-G, Somlai-Schweiger I, Heinkenwalder M, Bono MR, Schwarz C, Allende ML, Nickelsen J, Egaña JT. 2016. Towards Autotrophic Tissue Engineering: Photosynthetic Gene Therapy for Tissue Regeneration. Biomaterials 75:25-36.

Chávez MN, Aedo G, Fierro FA, Allende ML, Egaña JT. 2016. Zebrafish as an emerging model organism to study angiogenesis in development and regeneration. Front Physiol 7:56; doi: 10.3389/fphys.2016.00056.

Carrillo SA, Anguita-Salinas C, Peña OA, Morales RA, Muñoz-Sánchez S, Muñoz-Montecinos C, Paredes-Zúñiga S, Tapia K, Allende ML. 2016. Macrophage recruitment contributes to regeneration of mechanosensory hair cells in the zebrafish lateral line. J Cell Biochem 117(8):1880-9.

Sánchez M, Ceci, ML, Gutiérrez D, Anguita C, Allende ML. 2016. Mechanosensory organ regeneration in zebrafish depends on a population of multipotent progenitor cells kept latent by Schwann cells. BMC Biology 14: 27.

Aguilar R, Bustos FJ, Sáez M, Rojas A, Allende ML, van Wijnen AJ, van Zundert B, Montecino M. 2016. Polycomb PRC2 complex mediates epigenetic silencing of critical osteogenic master regulators in the hippocampus. BBA - Gene Regulatory Mechanisms. 1859(8):1043-55.

Pei W, Huang SC, Xu L, Pettie K Ceci ML, Sánchez M, Allende ML, Burgess SM. 2016. Loss of mgat5a mediated N-glycosylation stimulates regeneration in zebrafish. Cell Regen (Lond). 5:3.

Garrido V, Mendoza-Torres E, Riquelme J, Diaz A, Pizarro M, Bustamante M, Chávez MN, Ocaranza MP, Mellado R, Corbalan R, Allende ML, Lavandero S. 2017. Novel Therapies Targeting Cardioprotection and Regeneration. Curr Pharm Design 23: 2592-2615.

Paredes-Zúñiga S, Morales RA, Muñoz-Sánchez S, Muñoz-Montecinos C, Parada M, Tapia K, Rubilar C, Allende ML* , Peña OA*. 2017. CXCL12a acts as a hematopoietic tissue neutrophil retention signal that antagonizes recruitment to an injury site in the zebrafish larva. Immunogenetics 69(5):341-349.

Varas MA, Fariña A, Díaz-Pascual F, Ortíz-Severín J, Marcoleta AE, Allende ML, Santiviago CA, Chávez FP. 2017. Live cell imaging of Salmonella Typhimurium interaction with zebrafish larvae after injection and immersion delivery methods. J Microbiol Methods 135:20-25.

De la Paz J, Beiza N, Paredes-Zúñiga S, Hoare M, Allende ML. 2017. Triazole fungicides inhibit zebrafish hatching by blocking the secretory function of hatching gland cells.  Int J Mol Sci 18:710.

Pastenes L, Valdivieso C, Di Genova A, Travisany D, Montecino M, Orellana A, González M, Gutiérrez RA, Allende ML, Maass A, Méndez MA. 2017. Transcriptome analysis provides insight on local temperature adaptation to geothermal streams in larvae of the Andean toad Rhinella spinulosa (Anura, Bufonidae). Sci Rep 7(1):1966.

Varas MA, Ortíz-Severín J, Marcoleta AE, Díaz-Pascual F, Allende ML, Santiviago CA, Chávez FP. 2017. Salmonella Typhimurium induce cloacitis-like symptoms in zebrafish larvae. Microb Pathog 107:317-320.

Díaz-Pascual F, Ortíz-Severín J, Varas M, Allende ML*, Chávez FP*. 2017. In vivo host-pathogen interaction as revealed by global proteomic profiling of zebrafish larvae. Front. Cell. Infect. Microbiol. 7:334.

Marcoleta A, Varas M, Ortiz-Severín J, Vásquez L, Berríos-Pastén C, Sabag A, Chávez FP, Allende ML, Santiviago C, Monasterio O, Lagos R. 2018. Evaluating different virulence traits of Klebsiella pneumoniae using Dictyostelium discoideum and zebrafish larvae as host models. Front. Cell. Infect. Microbiol. 8:30.

Awan B, Turkov D, Schumacher C, Jacobo A, McEnerney A, Xu G,  Park D, Kalomoiris S, Nolta J, Jao L-E, Allende ML, Lebrilla C, Fierro FA. 2018. FGF2 induces migration of human bone marrow stromal cells by increasing core-fucosylations on N-glycans of integrins. Stem Cell Reports 11(2):325-333. https://doi.org/10.1016/j.stemcr.2018.06.007.

Pouchucq L, Undurraga CA, Fuentes R, Cornejo M, Allende ML, Monasterio A. 2018. γ-Tubulin small complex formation is essential for early zebrafish embryogenesis. Mech. Dev. 154: 145-152. https://doi.org/10.1016/j.mod.2018.06.006.

Rojas A, Sepúlveda H, Henríquez B, Aguilar R, Opazo T, Nardocci G, Bustos F, Lian JB, Stein JL, Stein GS, van Zundert B, van Wijnen AJ, Allende ML, Montecino M. 2018. Mll-COMPASS complexes mediate H3K4me3 enrichment and transcription of the osteoblast master gene Runx2/p57 in osteoblasts. J. Cell. Biochem. doi: 10.1002/jcp.27355.

Parada M, Clatworthy A, Hagendorn EJ, Ernst C, Henninger JE, Riquelme R, Jijón H, Villablanca EJ, Zon LI, Hung D, Allende ML. 2018. Generation of Mouse-Zebrafish Hematopoietic Tissue Chimeric Embryos by Xenotransplantation. Dis. Model. Mech. 11: dmm034876. doi: 10.1242/dmm.034876

Paredes-Zúñiga S, Trost N, De la Paz J, Alcayaga J, Allende ML. 2019. Behavioral effects of triadimefon in zebrafish are associated with alterations of the dopaminergic and serotonergic pathways. Prog. Neuro-Psychopharmacol. Biol. Psychiatry. 92:118-126. https://doi.org/10.1016/j.pnpbp.2018.12.012

Vidal EA, Moyano TC, Bustos BI, Pérez-Palma E, Moraga C, Riveras E, Montecinos A, Azócar L, Soto DC, Vidal M, Di Genova A, Puschel K, Nuernberg P, Buch S, Hampe J, Allende ML, Cambiazo V, González M, Hodar C, Montecino M, Muñoz-Espinoza C, Orellana A, Reyes-Jara A, Travisany D, Vizoso P, Moraga M, Eyheramendy S, Maass A, De Ferrari GV, Miquel JF, Gutiérrez RA. 2019. Whole Genome Sequence, Variant Discovery and Annotation in Mapuche-Huilliche Native South Americans. Sci. Rep. 9:2132 https://doi.org/10.1038/s41598-019-39391-z.

Morales RA, Allende ML. 2019. Peripheral Macrophages Promote Tissue Regeneration in Zebrafish by Fine-tuning the Inflammatory Response. Front. Immunol. 10:253. doi: 10.3389/fimmu.2019.00253.

Young RM, Hawkins TA, Cavodeassi F, Stickney HL, Schwarz Q, Lawrence LM, Wierzbicki C, Cheng BYL, Luo J, Ambrosio E, Klosner A, Sealy IM, Rowell J, Trivedi C, Bianco I, Allende ML, Busch-Nentwich EM, Gestri G, Wilson SM. 2019. Compensatory growth renders Tcf7l1a dispensable for eye formation despite its requirement in eye field specification. Elife 8:e40093. DOI: https://doi.org/10.7554/eLife.40093.

Anguita-Salinas C, Sánchez M, Morales RA, Ceci ML, Rojas-Benítez D, Allende ML. 2019. Cellular dynamics during spinal cord regeneration in larval zebrafish. Dev. Neurosci. 7:1-11. doi: 10.1159/000500185.

Miranda M, Egaña JT, Allende ML, Eblen-Zajjur, A. 2019. Myocardial monophasic action potential recorded by suction electrode for ionic current studies in zebrafish. Zebrafish 16(5):427-433. doi: 10.1089/zeb.2019.1753.

Young R, Ewan K, Ferrer V, Allende ML, Godovac-Zimmermann J, Dale T, Wilson SW. 2019. Developmentally regulated tcf7l2 splice variants mediate transcriptional repressor functions during eye formation. ELife 8:e51447 DOI: 10.7554/eLife.51447.

Rojas-Benítez D, Allende ML. 2020. Elongator subunit 3 (Elp3) is required for zebrafish trunk development. Int. J. Mol. Sci.  21(3). pii: E925. doi: 10.3390/ijms21030925.

Fehrmann-Cartes K, Coronado M, Hernandez A, Allende ML, Feijoo CG. 2019. Anti-inflammatory effects of Aloe vera on soy meal-induced intestinal inflammation in zebrafish. Fish and Shellfish Immunology 95:564-573. doi: 10.1016/j.fsi.2019.10.075.

Chavez MN, Morales RA, López-Crisosto C, Roa JC, Allende ML*, Lavandero S*. 2020. Autophagy activation in zebrafish heart regeneration. Sci. Rep. 10(1):2191. doi: 10.1038/s41598-020-59106-z.

Mandakovic D, Cintolesi A Maldonado J, Mendoza S Aïte M, Gaete A, Saitua F, Allende ML, Cambiazo V, Siegel A, Maass A, González M, Latorre M. 2020. Genome-scale metabolic models of microbacterium species isolated from a high altitude desert environment. Sci. Rep. 10: 1-13. https://doi.org/10.1038/s41598-020-62130-8.

Varas MA, Muñoz-Montecinos C, Kallens V, Simon V, Allende ML, Marcoleta AE and Lagos R. 2020. Exploiting Zebrafish Xenografts for Testing the in vivo Antitumorigenic Activity of Microcin E492 Against Human Colorectal Cancer Cells. Front. Microbiol. 11:405. doi: 10.3389/fmicb.2020.00405.

Cumplido N, Allende ML, Arratia G. 2020. From Evo to Devo: Patterning, Fusion and Evolution of the Zebrafish Terminal Vertebra. Frontiers in Zool. 17:18. doi: 10.1186/s12983-020-00364-y.

Covello, G; Rossello, FJ; Filosi, M; Gajardo, F; Domenici, E; Duchemin, A-L; Tremonti, FB; Eichenlaub, M; Polo, JM; Powell, D; Allende, ML; Ngai, J; Ramialison, M; Poggi, L. 2020. Transcriptome analysis of the zebrafish atoh7-/- mutant, lakritz, highlights Atoh7-dependent genetic networks with potential implications for human eye diseases. FASEB BioAdvances https://doi.org/10.1096/fba.2020-00030.

De la Paz J, Anguita-Salinas C, Díaz-Célis C, Chávez FP, Allende ML. 2020. The zebrafish perivitelline fluid provides maternally-inherited defensive immunity. Biomolecules. 10(9), 1274; https://doi.org/10.3390/biom10091274.

González D, Allende ML. 2021. Current advances in comprehending dynamics of regenerating axons and axon-glia interactions after peripheral nerve injury in zebrafish. Int J Mol Sci 22(5), 2484. https://doi.org/10.3390/ijms22052484..

Paredes-Zúñiga S, Ormeño F, Allende ML. 2021. Triadimefon triggers circling behavior and conditioned place preference/aversion in zebrafish in a dose dependent manner. Neurotoxicology and Teratology. Apr 8:106979. doi: 10.1016/j.ntt.2021.106979.

Fehrmann-Cartes K, Vega M, Enríquez R, Hernández AJ, Allende ML, Feijóo CG, Romero A. 2020. Aloe vera reduces gut inflammation induced by soybean meal in Atlantic salmon. Aquaculture (Submitted).

Eshel G, Araus V, Undurraga S, Soto DC, Moraga C, Alejandro Montecinos A, Moyano T, Maldonado J, Díaz F, Varala K, Nelson CW, Contreras-López O, Pal-Gabor H, Kraiser T, Carrasco-Puga G, Ricardo Nilo R, Charles M. Zegar CM, Orellana A, Montecino M, Maass A, Allende ML, DeSalle R, Stevenson DW, González M, Latorre C, Coruzzi GC, Gutiérrez RA. 2021. Plant ecological genomics at the limits of life in the Atacama Desert. P.N.A.S. 118 (46) e2101177118; https://doi.org/10.1073/pnas.2101177118.

García-González P, Tempio F, Fuentes C, Merino C, Vargas L, Simon V, Ramirez-Pereira M, Rojas V, Landskron G, Araya JP, Bastias C, Tordecillas R, Varas M, Maturana P, Marcoleta AE, Allende ML, Naves R, Hermoso M, Salazar-Onfray F, Lopez M, Bono MR, Osorio F. 2021. Dysregulated immune responses in Chilean COVID-19 patients correlating with disease severity and invasive oxygen requirements. Frontiers in Immunology. 12: 4429. DOI=10.3389/fimmu.2021.769059.

Marcoleta AE, Varas MA, Costa J, Rojas-Salgado J, Arros P, Berríos-Pastén C, Tapia S, Silva D, Fierro J, Canales N, Chávez FP, Gaete A, González M, Allende ML, Lagos R. 2022. The highly diverse Antarctic Peninsula soil microbiota as a source of novel resistance genes. Sci. Total Environ. 810:152003. doi: 10.1016/j.scitotenv.2021.152003.

Maldonado-Agurto R, Di Genova A, Nardocci G, Hodar C, Valdivieso C, Morales P, Gajardo F, Marina R, Gutiérrez RA, Orellana A, Cambiazo V, González M, Glavic A, Méndez M, Maass A, Allende ML*, Montecino MA*. 2022. Genome sequencing and transcriptomic analysis of the Andean killifish Orestias ascotanensis reveals adaptation to high-altitude aquatic life. Genomics. 114(1):305-315. doi: 10.1016/j.ygeno.2021.12.018.

Lewin HA, Richards S, Lieberman-Aiden E, Allende ML, et al. 2022. The Earth BioGenome Project 2020: Starting the Clock. P.N.A.S. 119 (4) e2115635118; https://doi.org/10.1073/pnas.2115635118.

Vásquez-Doorman C, Escobedo J, Allende ML. 2022. Current state of knowledge on freshwater planarians (Platyhelminthes, Tricladida, Dugesiidae) from Chile. Neotropical Biology and Conservation 17(3): 185-203. https://doi.org/10.3897/neotropical.17.e82779

Vásquez-Doorman C, Brusa F, Reyes J, Sluys R, Vila-Farré M, Rink JC, Allende ML. 2022. First finds in North and South America of Pentacoelum kazukolinda (Platyhelminthes: Tricladida), a worldwide invasive flatworm. BioInvasions Records. 11:1078-1094.

Fehrmann-Cartes K, Vega M, Vera F, Enríquez R, Feijóo CG, Allende ML, Hernández AJ and Romero A. 2022. Aloe vera reduces gut inflammation induced by soybean meal in Atlantic salmon (Salmo salar). Front. Anim. Sci. 3:1028318. doi: 10.3389/fanim.2022.1028318



Non-peer reviewed

Allende ML. 2020. Six Decades of Scientific Pan-Americanism. An Interview with Jorge E Allende. Int. J. Dev. Biol. (In Press) doi: 10.1387/ijdb.200050ma.

Casares F, Allende M, de Celis JF, Gónzalez-Reyes A, Martínez-Morales JR. 2020. OBITUARY. José Luis Gómez-Skarmeta (1966-2020). Development 147: dev197996. doi: 10.1242/dev.197996.



Books/Book chapters

Allende ML. 2018. La Lógica de los Genomas. Ediciones On Demand. Santiago, Chile. ISBN: 978-956-393-816-6.

Varas M.A., Ortíz-Severín J., Marcoleta A.E., Santiviago C.A., Allende M.L., Chávez F.P. 2019. Static Immersion and Injection Methods for Live Cell Imaging of Foodborne Pathogen Infections in Zebrafish Larvae. In: Bridier A. (eds) Foodborne Bacterial Pathogens. Methods in Molecular Biology, vol 1918. pp 183-190. Humana Press, New York, NY. DOI https://doi.org/10.1007/978-1-4939-9000-9_15

Aedo G, Miranda M, Chavez MN, Allende ML*, Egaña JT*. 2019. A reliable preclinical model to study the impact of cigarette smoke in physiology and disease. Current Protocols in Toxicology. 80:e78. doi: 10.1002/cptx.78.

Allende ML, Maass A. 2021. La genómica y la sistematización de la información como herramienta para la vigilancia anticipatoria y de respuesta a enfermedades infecciosas emergentes. Capítulo del libro “Ciencia, Conocimiento, Tecnología e Innovación: Nuevos Mapas para la Diplomacia”. Pp.1077. Academia Diplomática de Chile “Andrés Bello”. Miguel Angel González y Pedro Oyarce, Editores. Primera Edición, dic. 2021. Santiago de Chile.


















http://orcid.org/0000-0002-2783-2152

The labs' papers in PubMed